Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Ttc3O88196 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.63□□□□□ -0.39
Ttc3O88196 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ttc3O88196 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Ttc3O88196 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Ttc3O88196 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.63□□□□□ -0.39
Ttc3O88196 Gm13888-201ENSMUST00000119148 422 ntBASIC12.63□□□□□ -0.39
Ttc3O88196 Gm15004-201ENSMUST00000119192 630 ntBASIC12.63□□□□□ -0.39
Ttc3O88196 Gm15610-201ENSMUST00000120584 195 ntBASIC12.63□□□□□ -0.39
Ttc3O88196 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.63□□□□□ -0.39
Ttc3O88196 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.63□□□□□ -0.39
Ttc3O88196 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.63□□□□□ -0.39
Ttc3O88196 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.63□□□□□ -0.39
Ttc3O88196 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.63□□□□□ -0.39
Ttc3O88196 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.63□□□□□ -0.39
Ttc3O88196 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.63□□□□□ -0.39
Ttc3O88196 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ttc3O88196 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ttc3O88196 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.62□□□□□ -0.39
Ttc3O88196 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.62□□□□□ -0.39
Ttc3O88196 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ttc3O88196 Gm2517-201ENSMUST00000215651 348 ntBASIC12.62□□□□□ -0.39
Ttc3O88196 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.62□□□□□ -0.39
Ttc3O88196 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ttc3O88196 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.62□□□□□ -0.39
Ttc3O88196 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.62□□□□□ -0.39
Ttc3O88196 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ttc3O88196 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ttc3O88196 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ttc3O88196 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Ttc3O88196 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.61□□□□□ -0.39
Ttc3O88196 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Gm8574-201ENSMUST00000203207 924 ntBASIC12.61□□□□□ -0.39
Ttc3O88196 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.61□□□□□ -0.39
Ttc3O88196 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.61□□□□□ -0.39
Ttc3O88196 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ttc3O88196 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ttc3O88196 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ttc3O88196 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ttc3O88196 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.61□□□□□ -0.39
Ttc3O88196 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.61□□□□□ -0.39
Ttc3O88196 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.61□□□□□ -0.39
Ttc3O88196 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Gm22138-201ENSMUST00000158748 128 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms