Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.02□□□□□ -0.49
Pdlim1O70400 Gm9257-201ENSMUST00000221254 232 ntBASIC12.02□□□□□ -0.49
Pdlim1O70400 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.02□□□□□ -0.49
Pdlim1O70400 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.02□□□□□ -0.49
Pdlim1O70400 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.02□□□□□ -0.49
Pdlim1O70400 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pdlim1O70400 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.02□□□□□ -0.49
Pdlim1O70400 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Pdlim1O70400 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pdlim1O70400 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.02□□□□□ -0.49
Pdlim1O70400 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.01□□□□□ -0.49
Pdlim1O70400 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pdlim1O70400 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Pdlim1O70400 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pdlim1O70400 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.01□□□□□ -0.49
Pdlim1O70400 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.01□□□□□ -0.49
Pdlim1O70400 Gm4857-201ENSMUST00000192718 785 ntBASIC12.01□□□□□ -0.49
Pdlim1O70400 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.01□□□□□ -0.49
Pdlim1O70400 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.01□□□□□ -0.49
Pdlim1O70400 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pdlim1O70400 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pdlim1O70400 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.01□□□□□ -0.49
Pdlim1O70400 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pdlim1O70400 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Pdlim1O70400 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Pdlim1O70400 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.01□□□□□ -0.49
Pdlim1O70400 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.01□□□□□ -0.49
Pdlim1O70400 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim1O70400 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pdlim1O70400 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pdlim1O70400 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pdlim1O70400 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Gm7722-201ENSMUST00000120646 741 ntBASIC12□□□□□ -0.49
Pdlim1O70400 Gm12164-201ENSMUST00000121695 551 ntBASIC12□□□□□ -0.49
Pdlim1O70400 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12□□□□□ -0.49
Pdlim1O70400 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Pdlim1O70400 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pdlim1O70400 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pdlim1O70400 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12□□□□□ -0.49
Pdlim1O70400 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12□□□□□ -0.49
Pdlim1O70400 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Gm44913-201ENSMUST00000208060 2990 ntBASIC12□□□□□ -0.49
Pdlim1O70400 AC153929.1-201ENSMUST00000219009 303 ntBASIC12□□□□□ -0.49
Pdlim1O70400 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Gm5455-201ENSMUST00000058710 715 ntBASIC12□□□□□ -0.49
Pdlim1O70400 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Pdlim1O70400 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms