Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trdmt1O55055 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trdmt1O55055 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Trdmt1O55055 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.33□□□□□ -0.27
Trdmt1O55055 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Trdmt1O55055 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Trdmt1O55055 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trdmt1O55055 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.33□□□□□ -0.28
Trdmt1O55055 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Trdmt1O55055 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.33□□□□□ -0.28
Trdmt1O55055 Gm28324-201ENSMUST00000187913 264 ntBASIC13.33□□□□□ -0.28
Trdmt1O55055 Gm17931-201ENSMUST00000208132 634 ntBASIC13.33□□□□□ -0.28
Trdmt1O55055 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.33□□□□□ -0.28
Trdmt1O55055 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.33□□□□□ -0.28
Trdmt1O55055 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.33□□□□□ -0.28
Trdmt1O55055 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.33□□□□□ -0.28
Trdmt1O55055 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.33□□□□□ -0.28
Trdmt1O55055 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdmt1O55055 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.32□□□□□ -0.28
Trdmt1O55055 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.32□□□□□ -0.28
Trdmt1O55055 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Gm24844-201ENSMUST00000158679 127 ntBASIC13.32□□□□□ -0.28
Trdmt1O55055 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Gm25072-201ENSMUST00000175233 235 ntBASIC13.32□□□□□ -0.28
Trdmt1O55055 Gm18367-201ENSMUST00000176139 600 ntBASIC13.32□□□□□ -0.28
Trdmt1O55055 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Gm44329-201ENSMUST00000197469 112 ntBASIC13.32□□□□□ -0.28
Trdmt1O55055 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.32□□□□□ -0.28
Trdmt1O55055 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.32□□□□□ -0.28
Trdmt1O55055 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.32□□□□□ -0.28
Trdmt1O55055 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdmt1O55055 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trdmt1O55055 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms