Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.4□□□□□ -0.1
Smarce1O54941 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smarce1O54941 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.4□□□□□ -0.1
Smarce1O54941 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.4□□□□□ -0.1
Smarce1O54941 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smarce1O54941 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smarce1O54941 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.4□□□□□ -0.1
Smarce1O54941 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Smarce1O54941 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Smarce1O54941 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.39□□□□□ -0.11
Smarce1O54941 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.39□□□□□ -0.11
Smarce1O54941 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.39□□□□□ -0.11
Smarce1O54941 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smarce1O54941 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.39□□□□□ -0.11
Smarce1O54941 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smarce1O54941 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smarce1O54941 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smarce1O54941 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.39□□□□□ -0.11
Smarce1O54941 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.39□□□□□ -0.11
Smarce1O54941 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarce1O54941 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smarce1O54941 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Smarce1O54941 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarce1O54941 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.38□□□□□ -0.11
Smarce1O54941 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarce1O54941 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarce1O54941 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Smarce1O54941 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.38□□□□□ -0.11
Smarce1O54941 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.38□□□□□ -0.11
Smarce1O54941 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.38□□□□□ -0.11
Smarce1O54941 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.38□□□□□ -0.11
Smarce1O54941 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.38□□□□□ -0.11
Smarce1O54941 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarce1O54941 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarce1O54941 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Smarce1O54941 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.38□□□□□ -0.11
Smarce1O54941 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarce1O54941 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.37□□□□□ -0.11
Smarce1O54941 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Smarce1O54941 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Gm10434-201ENSMUST00000101158 471 ntBASIC14.37□□□□□ -0.11
Smarce1O54941 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarce1O54941 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms