Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sdc4O35988 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Sdc4O35988 Gm23596-201ENSMUST00000104304 132 ntBASIC12.49□□□□□ -0.41
Sdc4O35988 Gm11450-201ENSMUST00000121144 333 ntBASIC12.49□□□□□ -0.41
Sdc4O35988 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.49□□□□□ -0.41
Sdc4O35988 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Gm37986-201ENSMUST00000193285 383 ntBASIC12.49□□□□□ -0.41
Sdc4O35988 Gm8956-201ENSMUST00000203939 825 ntBASIC12.49□□□□□ -0.41
Sdc4O35988 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sdc4O35988 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Gm21811-201ENSMUST00000096485 930 ntBASIC12.49□□□□□ -0.41
Sdc4O35988 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Cog3-203ENSMUST00000227473 4197 ntBASIC12.49□□□□□ -0.41
Sdc4O35988 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sdc4O35988 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.49□□□□□ -0.41
Sdc4O35988 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
Sdc4O35988 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.48□□□□□ -0.41
Sdc4O35988 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.48□□□□□ -0.41
Sdc4O35988 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sdc4O35988 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sdc4O35988 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.48□□□□□ -0.41
Sdc4O35988 Gm12196-201ENSMUST00000120954 262 ntBASIC12.48□□□□□ -0.41
Sdc4O35988 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sdc4O35988 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.48□□□□□ -0.41
Sdc4O35988 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Gm8343-201ENSMUST00000182705 994 ntBASIC12.48□□□□□ -0.41
Sdc4O35988 Gm42997-202ENSMUST00000200321 985 ntBASIC12.48□□□□□ -0.41
Sdc4O35988 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.48□□□□□ -0.41
Sdc4O35988 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Gm807-202ENSMUST00000224929 408 ntBASIC12.48□□□□□ -0.41
Sdc4O35988 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.48□□□□□ -0.41
Sdc4O35988 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sdc4O35988 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sdc4O35988 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sdc4O35988 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc4O35988 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sdc4O35988 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.47□□□□□ -0.41
Sdc4O35988 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.47□□□□□ -0.41
Sdc4O35988 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.47□□□□□ -0.41
Sdc4O35988 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Sdc4O35988 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.47□□□□□ -0.41
Sdc4O35988 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.47□□□□□ -0.41
Sdc4O35988 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sdc4O35988 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.47□□□□□ -0.41
Sdc4O35988 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.47□□□□□ -0.41
Sdc4O35988 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Gm26286-201ENSMUST00000104166 134 ntBASIC12.47□□□□□ -0.41
Sdc4O35988 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.47□□□□□ -0.41
Sdc4O35988 Gm9062-201ENSMUST00000117712 727 ntBASIC12.47□□□□□ -0.41
Sdc4O35988 Gm14247-201ENSMUST00000120950 237 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms