Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.47□□□□□ -0.41
Atf6F6VAN0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gm2991-201ENSMUST00000173338 480 ntBASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gm27516-201ENSMUST00000184237 98 ntBASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gm6334-201ENSMUST00000207083 228 ntBASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.47□□□□□ -0.41
Atf6F6VAN0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gm9996-201ENSMUST00000070359 913 ntBASIC12.47□□□□□ -0.41
Atf6F6VAN0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.47□□□□□ -0.41
Atf6F6VAN0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.46□□□□□ -0.41
Atf6F6VAN0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Atf6F6VAN0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.46□□□□□ -0.41
Atf6F6VAN0 Gm12241-201ENSMUST00000118330 726 ntBASIC12.46□□□□□ -0.41
Atf6F6VAN0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.46□□□□□ -0.41
Atf6F6VAN0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Gm6621-201ENSMUST00000193251 772 ntBASIC12.46□□□□□ -0.41
Atf6F6VAN0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.46□□□□□ -0.41
Atf6F6VAN0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atf6F6VAN0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atf6F6VAN0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.46□□□□□ -0.42
Atf6F6VAN0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atf6F6VAN0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atf6F6VAN0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atf6F6VAN0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atf6F6VAN0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.42
Atf6F6VAN0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atf6F6VAN0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Atf6F6VAN0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Atf6F6VAN0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.45□□□□□ -0.42
Atf6F6VAN0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Gm9368-201ENSMUST00000219348 831 ntBASIC12.45□□□□□ -0.42
Atf6F6VAN0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.45□□□□□ -0.42
Atf6F6VAN0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms