Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4aE9Q735 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4aE9Q735 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4aE9Q735 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4aE9Q735 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4aE9Q735 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4aE9Q735 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.52□□□□□ -0.08
Ube4aE9Q735 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4aE9Q735 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4aE9Q735 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ube4aE9Q735 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Ube4aE9Q735 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4aE9Q735 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4aE9Q735 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4aE9Q735 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4aE9Q735 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4aE9Q735 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.52□□□□□ -0.09
Ube4aE9Q735 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.52□□□□□ -0.09
Ube4aE9Q735 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.52□□□□□ -0.09
Ube4aE9Q735 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4aE9Q735 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.52□□□□□ -0.09
Ube4aE9Q735 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.52□□□□□ -0.09
Ube4aE9Q735 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ube4aE9Q735 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Gm11949-201ENSMUST00000117640 372 ntBASIC14.51□□□□□ -0.09
Ube4aE9Q735 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ube4aE9Q735 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Gm6450-201ENSMUST00000200896 574 ntBASIC14.51□□□□□ -0.09
Ube4aE9Q735 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC14.51□□□□□ -0.09
Ube4aE9Q735 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.51□□□□□ -0.09
Ube4aE9Q735 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.51□□□□□ -0.09
Ube4aE9Q735 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4aE9Q735 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4aE9Q735 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4aE9Q735 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Gm11246-201ENSMUST00000120880 345 ntBASIC14.5□□□□□ -0.09
Ube4aE9Q735 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.5□□□□□ -0.09
Ube4aE9Q735 Gm43186-201ENSMUST00000198130 824 ntBASIC14.5□□□□□ -0.09
Ube4aE9Q735 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4aE9Q735 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4aE9Q735 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms