Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Gm13296-201ENSMUST00000117854 997 ntBASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Gm5419-201ENSMUST00000119301 527 ntBASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.25□□□□□ -0.77
Cpsf4lE9Q2N0 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Gm12036-201ENSMUST00000120008 530 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Gm26361-201ENSMUST00000158868 186 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Gm18893-201ENSMUST00000198416 943 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Gm5455-201ENSMUST00000058710 715 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms