Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Rprl1-201ENSMUST00000158050 327 ntBASIC10.87□□□□□ -0.67
Shank1D3YZU1 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Mir6998-201ENSMUST00000183343 64 ntBASIC10.87□□□□□ -0.67
Shank1D3YZU1 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC10.87□□□□□ -0.67
Shank1D3YZU1 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Gm12579-201ENSMUST00000118040 783 ntBASIC10.87□□□□□ -0.67
Shank1D3YZU1 Gm15352-201ENSMUST00000118696 270 ntBASIC10.87□□□□□ -0.67
Shank1D3YZU1 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.87□□□□□ -0.67
Shank1D3YZU1 Gm11980-201ENSMUST00000121445 986 ntBASIC10.87□□□□□ -0.67
Shank1D3YZU1 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.87□□□□□ -0.67
Shank1D3YZU1 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.87□□□□□ -0.67
Shank1D3YZU1 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shank1D3YZU1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Gm24231-201ENSMUST00000104315 133 ntBASIC10.86□□□□□ -0.67
Shank1D3YZU1 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Gm5419-201ENSMUST00000119301 527 ntBASIC10.86□□□□□ -0.67
Shank1D3YZU1 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms