Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Igkv8-27A0A0G2JF28 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 AC154171.2-201ENSMUST00000225219 2652 ntBASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gm44826-201ENSMUST00000207648 2332 ntBASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gm12260-201ENSMUST00000122447 411 ntBASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Mir1895-201ENSMUST00000122615 79 ntBASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gm28693-202ENSMUST00000190758 331 ntBASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gm7390-201ENSMUST00000212452 1216 ntBASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 AC165260.3-202ENSMUST00000224550 1031 ntBASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Igkv8-27A0A0G2JF28 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms