Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Mir7023-201ENSMUST00000185093 64 ntBASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm5035-201ENSMUST00000215581 927 ntBASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 AC156560.2-201ENSMUST00000221232 264 ntBASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 AC125117.1-201ENSMUST00000228121 468 ntBASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm28631-201ENSMUST00000190740 334 ntBASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm18473-201ENSMUST00000220543 868 ntBASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 AC124732.1-201ENSMUST00000221551 910 ntBASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms