Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm24830-201ENSMUST00000102024 166 ntBASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm13392-201ENSMUST00000117708 150 ntBASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm28882-201ENSMUST00000185504 314 ntBASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm43118-201ENSMUST00000199149 775 ntBASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm9004-201ENSMUST00000218739 1222 ntBASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm26232-201ENSMUST00000083360 166 ntBASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm10478-201ENSMUST00000084451 396 ntBASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav9n-2A0A0G2JDP3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm8908-201ENSMUST00000121633 1024 ntBASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Olfr284-202ENSMUST00000206647 966 ntBASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm6013-201ENSMUST00000212264 699 ntBASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm7046-201ENSMUST00000221351 977 ntBASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Morn2-202ENSMUST00000227729 656 ntBASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms