Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Gm23251-201ENSMUST00000103773 110 ntBASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Gm11663-201ENSMUST00000117888 290 ntBASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Gm14263-201ENSMUST00000117955 746 ntBASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Gm15004-201ENSMUST00000119192 630 ntBASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Gm20426-201ENSMUST00000173657 440 ntBASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Gm5733-201ENSMUST00000190232 939 ntBASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Gm3786-201ENSMUST00000202659 378 ntBASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm13611-201ENSMUST00000118269 318 ntBASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm13408-201ENSMUST00000119822 798 ntBASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm13935-201ENSMUST00000121859 798 ntBASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm19287-201ENSMUST00000203190 358 ntBASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smarcb1Q9Z0H3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms