Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.82□□□□□ -0.52
Cdh17Q9R100 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Rprl1-201ENSMUST00000158050 327 ntBASIC11.82□□□□□ -0.52
Cdh17Q9R100 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Gm5370-201ENSMUST00000187187 574 ntBASIC11.82□□□□□ -0.52
Cdh17Q9R100 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.82□□□□□ -0.52
Cdh17Q9R100 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.82□□□□□ -0.52
Cdh17Q9R100 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.82□□□□□ -0.52
Cdh17Q9R100 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.82□□□□□ -0.52
Cdh17Q9R100 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.82□□□□□ -0.52
Cdh17Q9R100 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh17Q9R100 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh17Q9R100 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Gm43133-201ENSMUST00000197472 463 ntBASIC11.81□□□□□ -0.52
Cdh17Q9R100 Gm17931-201ENSMUST00000208132 634 ntBASIC11.81□□□□□ -0.52
Cdh17Q9R100 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Gm19994-201ENSMUST00000217086 586 ntBASIC11.81□□□□□ -0.52
Cdh17Q9R100 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Gm9996-201ENSMUST00000070359 913 ntBASIC11.81□□□□□ -0.52
Cdh17Q9R100 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.81□□□□□ -0.52
Cdh17Q9R100 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh17Q9R100 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.81□□□□□ -0.52
Cdh17Q9R100 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.8□□□□□ -0.52
Cdh17Q9R100 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms