Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Gm9449-201ENSMUST00000207265 1011 ntBASIC9.68□□□□□ -0.86
Smco4Q9JIS3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco4Q9JIS3 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Gm27772-201ENSMUST00000184900 187 ntBASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Gm18916-201ENSMUST00000198264 1246 ntBASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Gm18195-201ENSMUST00000207604 706 ntBASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms