Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm14760-201ENSMUST00000121831 999 ntBASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm9358-201ENSMUST00000183067 927 ntBASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm17831-201ENSMUST00000205579 900 ntBASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rrp8Q9DB85 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gm11246-201ENSMUST00000120880 345 ntBASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gm22144-201ENSMUST00000157402 102 ntBASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gm27530-201ENSMUST00000184096 98 ntBASIC11.9□□□□□ -0.5
Rrp8Q9DB85 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gm9797-202ENSMUST00000218003 294 ntBASIC11.9□□□□□ -0.5
Rrp8Q9DB85 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gm5705-201ENSMUST00000066241 711 ntBASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rrp8Q9DB85 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rrp8Q9DB85 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Rrp8Q9DB85 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms