Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3a3Q9D554 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3a3Q9D554 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3a3Q9D554 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Gm24231-201ENSMUST00000104315 133 ntBASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3a3Q9D554 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Gm27989-201ENSMUST00000184721 107 ntBASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sf3a3Q9D554 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.24□□□□□ -0.45
Sf3a3Q9D554 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Gm23363-201ENSMUST00000175024 79 ntBASIC12.23□□□□□ -0.45
Sf3a3Q9D554 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms