Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.51□□□□□ -0.57
Ska1Q9CPV1 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Gm44882-201ENSMUST00000205702 802 ntBASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ska1Q9CPV1 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Gm4984-201ENSMUST00000115987 360 ntBASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms