Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Gm44958-201ENSMUST00000203734 736 ntBASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.44□□□□□ -0.58
Nkd1Q99MH6 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.43□□□□□ -0.58
Nkd1Q99MH6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Gm25927-201ENSMUST00000175058 117 ntBASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Gm27023-201ENSMUST00000182372 285 ntBASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Gm5186-201ENSMUST00000218781 920 ntBASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Gm10076-201ENSMUST00000073238 384 ntBASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nkd1Q99MH6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Gm12314-201ENSMUST00000118104 538 ntBASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Gm11591-201ENSMUST00000120063 702 ntBASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Gm7809-201ENSMUST00000153199 742 ntBASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Gm23119-201ENSMUST00000158610 140 ntBASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkd1Q99MH6 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.42□□□□□ -0.58
Nkd1Q99MH6 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms