Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cdk5rap3Q99LM2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdk5rap3Q99LM2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdk5rap3Q99LM2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Gm14999-201ENSMUST00000121039 624 ntBASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Cdk5rap3Q99LM2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gm24934-201ENSMUST00000103764 111 ntBASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gm23912-201ENSMUST00000104687 87 ntBASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gm12058-201ENSMUST00000118614 437 ntBASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gm37201-201ENSMUST00000191845 523 ntBASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms