Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vmp1Q99KU0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Gm38092-201ENSMUST00000195600 653 ntBASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Gm9368-201ENSMUST00000219348 831 ntBASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Gm7046-201ENSMUST00000221351 977 ntBASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.77□□□□□ -0.53
Vmp1Q99KU0 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.77□□□□□ -0.53
Vmp1Q99KU0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.76□□□□□ -0.53
Vmp1Q99KU0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Gm4986-201ENSMUST00000119731 549 ntBASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Gm27516-201ENSMUST00000184237 98 ntBASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Gm45930-201ENSMUST00000221330 292 ntBASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Olfr582-201ENSMUST00000098212 960 ntBASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vmp1Q99KU0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms