Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.07□□□□□ -0.16
Smc1bQ920F6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.06□□□□□ -0.16
Smc1bQ920F6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.06□□□□□ -0.16
Smc1bQ920F6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.06□□□□□ -0.16
Smc1bQ920F6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Gm13888-201ENSMUST00000119148 422 ntBASIC14.06□□□□□ -0.16
Smc1bQ920F6 Gm14832-201ENSMUST00000121289 322 ntBASIC14.06□□□□□ -0.16
Smc1bQ920F6 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.06□□□□□ -0.16
Smc1bQ920F6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Gm27627-201ENSMUST00000183644 150 ntBASIC14.06□□□□□ -0.16
Smc1bQ920F6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.06□□□□□ -0.16
Smc1bQ920F6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.06□□□□□ -0.16
Smc1bQ920F6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc1bQ920F6 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.06□□□□□ -0.16
Smc1bQ920F6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.05□□□□□ -0.16
Smc1bQ920F6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.05□□□□□ -0.16
Smc1bQ920F6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.05□□□□□ -0.16
Smc1bQ920F6 Gm12380-201ENSMUST00000119012 544 ntBASIC14.05□□□□□ -0.16
Smc1bQ920F6 Gm14999-201ENSMUST00000121039 624 ntBASIC14.05□□□□□ -0.16
Smc1bQ920F6 Gm16397-201ENSMUST00000122201 494 ntBASIC14.05□□□□□ -0.16
Smc1bQ920F6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Gm8018-201ENSMUST00000173536 789 ntBASIC14.05□□□□□ -0.16
Smc1bQ920F6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Gm19187-201ENSMUST00000206781 892 ntBASIC14.05□□□□□ -0.16
Smc1bQ920F6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.05□□□□□ -0.16
Smc1bQ920F6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.05□□□□□ -0.16
Smc1bQ920F6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms