Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Gm8712-201ENSMUST00000221090 701 ntBASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Gm13665-201ENSMUST00000120830 528 ntBASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Gm24845-201ENSMUST00000158034 109 ntBASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Gm17376-201ENSMUST00000166016 84 ntBASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdha3Q91Y16 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm24830-201ENSMUST00000102024 166 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Mir877-201ENSMUST00000104738 85 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms