Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.06□□□□□ -0.48
Usb1Q91W78 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Usb1Q91W78 Gm27023-201ENSMUST00000182372 285 ntBASIC12.06□□□□□ -0.48
Usb1Q91W78 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.06□□□□□ -0.48
Usb1Q91W78 Gm38241-201ENSMUST00000192641 898 ntBASIC12.06□□□□□ -0.48
Usb1Q91W78 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.06□□□□□ -0.48
Usb1Q91W78 Gm39404-201ENSMUST00000216350 313 ntBASIC12.06□□□□□ -0.48
Usb1Q91W78 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.06□□□□□ -0.48
Usb1Q91W78 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.06□□□□□ -0.48
Usb1Q91W78 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Usb1Q91W78 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Usb1Q91W78 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Usb1Q91W78 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Gm15236-201ENSMUST00000117309 379 ntBASIC12.05□□□□□ -0.48
Usb1Q91W78 Gm11531-201ENSMUST00000117614 555 ntBASIC12.05□□□□□ -0.48
Usb1Q91W78 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.05□□□□□ -0.48
Usb1Q91W78 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Gm37201-201ENSMUST00000191845 523 ntBASIC12.05□□□□□ -0.48
Usb1Q91W78 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Gm6082-201ENSMUST00000215204 454 ntBASIC12.05□□□□□ -0.48
Usb1Q91W78 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Usb1Q91W78 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.05□□□□□ -0.48
Usb1Q91W78 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.05□□□□□ -0.48
Usb1Q91W78 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Usb1Q91W78 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Usb1Q91W78 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Usb1Q91W78 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usb1Q91W78 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Usb1Q91W78 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Usb1Q91W78 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms