Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rnf8Q8VC56 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Gm11591-201ENSMUST00000120063 702 ntBASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Gm6222-202ENSMUST00000182143 629 ntBASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Gm35960-201ENSMUST00000202712 767 ntBASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf8Q8VC56 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Gm25261-201ENSMUST00000157416 134 ntBASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Gm43133-201ENSMUST00000197472 463 ntBASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.75□□□□□ -0.53
Rnf8Q8VC56 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.75□□□□□ -0.53
Rnf8Q8VC56 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Gm24526-201ENSMUST00000082921 158 ntBASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf8Q8VC56 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Rnf8Q8VC56 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms