Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdt1Q8R4E9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdt1Q8R4E9 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdt1Q8R4E9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdt1Q8R4E9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdt1Q8R4E9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdt1Q8R4E9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm13611-201ENSMUST00000118269 318 ntBASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm9550-201ENSMUST00000161130 862 ntBASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm37835-201ENSMUST00000193305 361 ntBASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdt1Q8R4E9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Gm15703-201ENSMUST00000120250 880 ntBASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Gm9630-201ENSMUST00000178304 885 ntBASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Gm7467-201ENSMUST00000185173 652 ntBASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Gm8885-201ENSMUST00000189382 598 ntBASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Gm44651-201ENSMUST00000207343 372 ntBASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdt1Q8R4E9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms