Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm43589-201ENSMUST00000199400 1523 ntBASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm38014-201ENSMUST00000193349 2612 ntBASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Gm12058-201ENSMUST00000118614 437 ntBASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Gm44100-201ENSMUST00000204329 436 ntBASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Gm44262-201ENSMUST00000204969 372 ntBASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Cd8a-202ENSMUST00000172321 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Gm45354-201ENSMUST00000199820 2557 ntBASIC11.22□□□□□ -0.61
Cuedc1Q8R3V6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Gm18829-201ENSMUST00000188150 1622 ntBASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Gm20426-201ENSMUST00000173657 440 ntBASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Gm4870-201ENSMUST00000198525 1251 ntBASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.21□□□□□ -0.61
Cuedc1Q8R3V6 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms