Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Gm14585-201ENSMUST00000120713 634 ntBASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Gm11246-201ENSMUST00000120880 345 ntBASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Gm5537-201ENSMUST00000091117 1252 ntBASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp7Q8R1T1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Gm13916-201ENSMUST00000117368 628 ntBASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Gm15207-201ENSMUST00000119259 442 ntBASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Gm15610-201ENSMUST00000120584 195 ntBASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp7Q8R1T1 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm8038-201ENSMUST00000164674 2044 ntBASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm4310-201ENSMUST00000177847 889 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms