Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx54Q8K4L0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Gm6423-201ENSMUST00000204315 934 ntBASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Arhgef33-210ENSMUST00000225548 456 ntBASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Gm23105-201ENSMUST00000083719 134 ntBASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx54Q8K4L0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Gm37852-201ENSMUST00000193027 350 ntBASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Gm37638-201ENSMUST00000194337 1123 ntBASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Gm6855-201ENSMUST00000206307 790 ntBASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Gm43807-201ENSMUST00000200678 1781 ntBASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx54Q8K4L0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Gm14993-201ENSMUST00000121180 164 ntBASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Gm9089-201ENSMUST00000122027 526 ntBASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Gm16167-201ENSMUST00000160428 1065 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms