Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Syne4Q8CII8 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.7□□□□□ -0.22
Syne4Q8CII8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Gm14942-201ENSMUST00000119642 336 ntBASIC13.7□□□□□ -0.22
Syne4Q8CII8 Gm14219-201ENSMUST00000120414 288 ntBASIC13.7□□□□□ -0.22
Syne4Q8CII8 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.7□□□□□ -0.22
Syne4Q8CII8 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.7□□□□□ -0.22
Syne4Q8CII8 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne4Q8CII8 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Gm25063-201ENSMUST00000104666 94 ntBASIC13.69□□□□□ -0.22
Syne4Q8CII8 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.69□□□□□ -0.22
Syne4Q8CII8 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.69□□□□□ -0.22
Syne4Q8CII8 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.69□□□□□ -0.22
Syne4Q8CII8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.69□□□□□ -0.22
Syne4Q8CII8 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Gm12407-201ENSMUST00000180219 324 ntBASIC13.69□□□□□ -0.22
Syne4Q8CII8 Gm38117-201ENSMUST00000194653 939 ntBASIC13.69□□□□□ -0.22
Syne4Q8CII8 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne4Q8CII8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.68□□□□□ -0.22
Syne4Q8CII8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.68□□□□□ -0.22
Syne4Q8CII8 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Syne4Q8CII8 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms