Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm3332-201ENSMUST00000189337 928 ntBASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Gm21811-201ENSMUST00000096485 930 ntBASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Gm27530-201ENSMUST00000184096 98 ntBASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Gm9555-201ENSMUST00000200908 583 ntBASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Gm44124-201ENSMUST00000204159 472 ntBASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Spcs1-203ENSMUST00000226374 592 ntBASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rdh1Q8CGV4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Gm23699-201ENSMUST00000158835 135 ntBASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Gm17931-201ENSMUST00000208132 634 ntBASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rdh1Q8CGV4 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rdh1Q8CGV4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rdh1Q8CGV4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rdh1Q8CGV4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rdh1Q8CGV4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rdh1Q8CGV4 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.77□□□□□ -0.52
Rdh1Q8CGV4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.77□□□□□ -0.52
Rdh1Q8CGV4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Rdh1Q8CGV4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.77□□□□□ -0.52
Rdh1Q8CGV4 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.77□□□□□ -0.52
Rdh1Q8CGV4 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rdh1Q8CGV4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Rdh1Q8CGV4 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rdh1Q8CGV4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.77□□□□□ -0.53
Rdh1Q8CGV4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms