Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Polr2bQ8CFI7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Gm14017-201ENSMUST00000121934 386 ntBASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Polr2bQ8CFI7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Gm12997-201ENSMUST00000120207 640 ntBASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Gm2260-201ENSMUST00000184965 657 ntBASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Gm17812-201ENSMUST00000204935 318 ntBASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Polr2bQ8CFI7 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Polr2bQ8CFI7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.03□□□□□ -0.32
Polr2bQ8CFI7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Polr2bQ8CFI7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Polr2bQ8CFI7 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.03□□□□□ -0.32
Polr2bQ8CFI7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Polr2bQ8CFI7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Polr2bQ8CFI7 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Polr2bQ8CFI7 Gm23912-201ENSMUST00000104687 87 ntBASIC13.03□□□□□ -0.32
Polr2bQ8CFI7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Polr2bQ8CFI7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms