Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps53Q8CCB4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Gm12058-201ENSMUST00000118614 437 ntBASIC14.15□□□□□ -0.14
Vps53Q8CCB4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Daam2-202ENSMUST00000224595 1926 ntBASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps53Q8CCB4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Vps53Q8CCB4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.15□□□□□ -0.15
Vps53Q8CCB4 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Gm13875-201ENSMUST00000120162 282 ntBASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Rmrp-201ENSMUST00000157463 271 ntBASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Gm43378-201ENSMUST00000199336 582 ntBASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Gm43947-201ENSMUST00000203019 959 ntBASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.14□□□□□ -0.15
Vps53Q8CCB4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps53Q8CCB4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms