Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Gm28071-201ENSMUST00000190355 478 ntBASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa4Q8CA71 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa4Q8CA71 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Shisa4Q8CA71 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa4Q8CA71 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa4Q8CA71 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Shisa4Q8CA71 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa4Q8CA71 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa4Q8CA71 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa4Q8CA71 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa4Q8CA71 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa4Q8CA71 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Shisa4Q8CA71 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Gm17040-202ENSMUST00000170597 889 ntBASIC14.02□□□□□ -0.17
Shisa4Q8CA71 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Gm35960-201ENSMUST00000202712 767 ntBASIC14.02□□□□□ -0.17
Shisa4Q8CA71 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms