Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx1Q8C8B0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Gm12857-201ENSMUST00000117678 592 ntBASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Gm27530-201ENSMUST00000184096 98 ntBASIC14.13□□□□□ -0.15
Alx1Q8C8B0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Alx1Q8C8B0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Gm807-202ENSMUST00000224929 408 ntBASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.12□□□□□ -0.15
Alx1Q8C8B0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Gm15515-201ENSMUST00000117827 822 ntBASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Gm14724-201ENSMUST00000118400 537 ntBASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Gm8566-201ENSMUST00000120174 465 ntBASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Gm12196-201ENSMUST00000120954 262 ntBASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx1Q8C8B0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms