Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Gm8913-201ENSMUST00000209491 641 ntBASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 AC159205.5-202ENSMUST00000224849 386 ntBASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc60Q8C4J0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc60Q8C4J0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc60Q8C4J0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC15.46■□□□□ 0.06
Ccdc60Q8C4J0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc60Q8C4J0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Gm13996-201ENSMUST00000118456 430 ntBASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc60Q8C4J0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Gm14130-201ENSMUST00000118417 987 ntBASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Gm5419-201ENSMUST00000119301 527 ntBASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Gm5706-201ENSMUST00000181525 993 ntBASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Gm17931-201ENSMUST00000208132 634 ntBASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Gm5455-201ENSMUST00000058710 715 ntBASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms