Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Gm24245-201ENSMUST00000157318 57 ntBASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Gm43575-201ENSMUST00000196420 516 ntBASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.99□□□□□ -0.81
Smco3Q8BQM7 AC166051.1-201ENSMUST00000214313 210 ntBASIC9.99□□□□□ -0.81
Smco3Q8BQM7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 AC139382.1-201ENSMUST00000221402 498 ntBASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Gm19220-201ENSMUST00000222682 803 ntBASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Gm12151-201ENSMUST00000121374 290 ntBASIC9.98□□□□□ -0.81
Smco3Q8BQM7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Gm6152-201ENSMUST00000151704 340 ntBASIC9.98□□□□□ -0.81
Smco3Q8BQM7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Gm24694-201ENSMUST00000180054 110 ntBASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Gm27663-201ENSMUST00000184839 110 ntBASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 AC156560.2-201ENSMUST00000221232 264 ntBASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco3Q8BQM7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco3Q8BQM7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Smco3Q8BQM7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.97□□□□□ -0.81
Smco3Q8BQM7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco3Q8BQM7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco3Q8BQM7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms