Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Gm22146-201ENSMUST00000157397 288 ntBASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Gm26989-201ENSMUST00000182608 749 ntBASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Gm4034-201ENSMUST00000187674 480 ntBASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Gm8459-201ENSMUST00000162504 760 ntBASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Gm17931-201ENSMUST00000208132 634 ntBASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Gm18514-201ENSMUST00000218980 436 ntBASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trnp1Q80ZI1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Gm12218-201ENSMUST00000117666 399 ntBASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Gm8723-201ENSMUST00000166076 820 ntBASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Gm8701-201ENSMUST00000169259 874 ntBASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Gm7940-201ENSMUST00000218195 769 ntBASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Gm16380-201ENSMUST00000077997 478 ntBASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trnp1Q80ZI1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms