Protein–RNA interactions for Protein: Q80YR7

Clspn, Claspin, mousemouse

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClspnQ80YR7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClspnQ80YR7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClspnQ80YR7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC17.31■□□□□ 0.36
ClspnQ80YR7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClspnQ80YR7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClspnQ80YR7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC17.31■□□□□ 0.36
ClspnQ80YR7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ClspnQ80YR7 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC17.31■□□□□ 0.36
ClspnQ80YR7 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClspnQ80YR7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ClspnQ80YR7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Gm13316-201ENSMUST00000140537 691 ntBASIC17.3■□□□□ 0.36
ClspnQ80YR7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Gm18304-201ENSMUST00000189162 546 ntBASIC17.3■□□□□ 0.36
ClspnQ80YR7 Gm42693-201ENSMUST00000196779 631 ntBASIC17.3■□□□□ 0.36
ClspnQ80YR7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Gm44405-201ENSMUST00000198952 126 ntBASIC17.3■□□□□ 0.36
ClspnQ80YR7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Gm7046-201ENSMUST00000221351 977 ntBASIC17.3■□□□□ 0.36
ClspnQ80YR7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClspnQ80YR7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.29■□□□□ 0.36
ClspnQ80YR7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Gm43630-201ENSMUST00000201550 776 ntBASIC17.29■□□□□ 0.36
ClspnQ80YR7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC17.29■□□□□ 0.36
ClspnQ80YR7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClspnQ80YR7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Gm13342-201ENSMUST00000121055 207 ntBASIC17.28■□□□□ 0.36
ClspnQ80YR7 Gm8908-201ENSMUST00000121633 1024 ntBASIC17.28■□□□□ 0.36
ClspnQ80YR7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.28■□□□□ 0.36
ClspnQ80YR7 Gm29396-201ENSMUST00000185659 716 ntBASIC17.28■□□□□ 0.36
ClspnQ80YR7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Gm9823-201ENSMUST00000051212 327 ntBASIC17.28■□□□□ 0.36
ClspnQ80YR7 Gm9899-201ENSMUST00000065519 555 ntBASIC17.28■□□□□ 0.36
ClspnQ80YR7 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.28■□□□□ 0.36
ClspnQ80YR7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC17.28■□□□□ 0.36
ClspnQ80YR7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC17.28■□□□□ 0.36
ClspnQ80YR7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms