Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim36Q80WG7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim36Q80WG7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim36Q80WG7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.76□□□□□ -0.53
Trim36Q80WG7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trim36Q80WG7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Gm14760-201ENSMUST00000121831 999 ntBASIC11.75□□□□□ -0.53
Trim36Q80WG7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Gm43758-201ENSMUST00000199500 367 ntBASIC11.75□□□□□ -0.53
Trim36Q80WG7 Gm10608-202ENSMUST00000213924 676 ntBASIC11.75□□□□□ -0.53
Trim36Q80WG7 Gm9368-201ENSMUST00000219348 831 ntBASIC11.75□□□□□ -0.53
Trim36Q80WG7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.75□□□□□ -0.53
Trim36Q80WG7 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Map1b-203ENSMUST00000223725 2669 ntBASIC11.75□□□□□ -0.53
Trim36Q80WG7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.75□□□□□ -0.53
Trim36Q80WG7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim36Q80WG7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Rgr-203ENSMUST00000225070 4704 ntBASIC11.74□□□□□ -0.53
Trim36Q80WG7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.74□□□□□ -0.53
Trim36Q80WG7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim36Q80WG7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim36Q80WG7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Gm3890-201ENSMUST00000182416 207 ntBASIC11.74□□□□□ -0.53
Trim36Q80WG7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Gm4768-201ENSMUST00000206199 686 ntBASIC11.74□□□□□ -0.53
Trim36Q80WG7 Gm45865-201ENSMUST00000211815 945 ntBASIC11.74□□□□□ -0.53
Trim36Q80WG7 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.74□□□□□ -0.53
Trim36Q80WG7 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.74□□□□□ -0.53
Trim36Q80WG7 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.74□□□□□ -0.53
Trim36Q80WG7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim36Q80WG7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms