Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Gm25668-201ENSMUST00000157700 129 ntBASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Gm44967-201ENSMUST00000207047 631 ntBASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.12□□□□□ -0.47
Rpp38Q80UU2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpp38Q80UU2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Gm13296-201ENSMUST00000117854 997 ntBASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Gm13665-201ENSMUST00000120830 528 ntBASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpp38Q80UU2 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms