Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Gm37042-201ENSMUST00000193816 581 ntBASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Gm42599-201ENSMUST00000201308 469 ntBASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Gm44882-201ENSMUST00000205702 802 ntBASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Mir433-201ENSMUST00000093564 124 ntBASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf1Q69ZI1 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf1Q69ZI1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sh3rf1Q69ZI1 Cog3-203ENSMUST00000227473 4197 ntBASIC12.33□□□□□ -0.43
Sh3rf1Q69ZI1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sh3rf1Q69ZI1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Sh3rf1Q69ZI1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.33□□□□□ -0.43
Sh3rf1Q69ZI1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sh3rf1Q69ZI1 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sh3rf1Q69ZI1 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Gm16570-201ENSMUST00000161951 436 ntBASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Morn2-202ENSMUST00000227729 656 ntBASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.33□□□□□ -0.44
Sh3rf1Q69ZI1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms