Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
VclQ64727 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
VclQ64727 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
VclQ64727 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
VclQ64727 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
VclQ64727 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
VclQ64727 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.97□□□□□ -0.49
VclQ64727 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.97□□□□□ -0.49
VclQ64727 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VclQ64727 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.97□□□□□ -0.49
VclQ64727 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.97□□□□□ -0.49
VclQ64727 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
VclQ64727 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
VclQ64727 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.97□□□□□ -0.49
VclQ64727 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.97□□□□□ -0.49
VclQ64727 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Gm18212-201ENSMUST00000211678 889 ntBASIC11.97□□□□□ -0.49
VclQ64727 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.97□□□□□ -0.49
VclQ64727 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
VclQ64727 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VclQ64727 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VclQ64727 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
VclQ64727 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
VclQ64727 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.96□□□□□ -0.49
VclQ64727 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
VclQ64727 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.96□□□□□ -0.49
VclQ64727 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.96□□□□□ -0.49
VclQ64727 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.96□□□□□ -0.49
VclQ64727 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.96□□□□□ -0.49
VclQ64727 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
VclQ64727 Gm11989-201ENSMUST00000117240 672 ntBASIC11.96□□□□□ -0.49
VclQ64727 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.96□□□□□ -0.49
VclQ64727 Gm11362-201ENSMUST00000118838 850 ntBASIC11.96□□□□□ -0.49
VclQ64727 Gm14017-201ENSMUST00000121934 386 ntBASIC11.96□□□□□ -0.49
VclQ64727 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
VclQ64727 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.96□□□□□ -0.49
VclQ64727 Gm25700-201ENSMUST00000177693 110 ntBASIC11.96□□□□□ -0.49
VclQ64727 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.96□□□□□ -0.49
VclQ64727 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.96□□□□□ -0.49
VclQ64727 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
VclQ64727 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
VclQ64727 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.96□□□□□ -0.49
VclQ64727 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VclQ64727 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VclQ64727 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VclQ64727 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms