Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm26361-201ENSMUST00000158868 186 ntBASIC11.73□□□□□ -0.53
Sdc3Q64519 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sdc3Q64519 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.73□□□□□ -0.53
Sdc3Q64519 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Gm5070-201ENSMUST00000177599 862 ntBASIC11.73□□□□□ -0.53
Sdc3Q64519 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Gm18304-201ENSMUST00000189162 546 ntBASIC11.73□□□□□ -0.53
Sdc3Q64519 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.73□□□□□ -0.53
Sdc3Q64519 Gm37466-201ENSMUST00000195692 652 ntBASIC11.73□□□□□ -0.53
Sdc3Q64519 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.73□□□□□ -0.53
Sdc3Q64519 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.73□□□□□ -0.53
Sdc3Q64519 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.73□□□□□ -0.53
Sdc3Q64519 Gm45186-201ENSMUST00000206874 478 ntBASIC11.73□□□□□ -0.53
Sdc3Q64519 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.73□□□□□ -0.53
Sdc3Q64519 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.73□□□□□ -0.53
Sdc3Q64519 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sdc3Q64519 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.73□□□□□ -0.53
Sdc3Q64519 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.72□□□□□ -0.53
Sdc3Q64519 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Sdc3Q64519 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sdc3Q64519 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.72□□□□□ -0.53
Sdc3Q64519 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Gm14208-201ENSMUST00000119645 678 ntBASIC11.72□□□□□ -0.53
Sdc3Q64519 Gm14277-201ENSMUST00000121195 360 ntBASIC11.72□□□□□ -0.53
Sdc3Q64519 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.72□□□□□ -0.53
Sdc3Q64519 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Sdc3Q64519 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sdc3Q64519 Gm27341-201ENSMUST00000183570 106 ntBASIC11.72□□□□□ -0.53
Sdc3Q64519 Gm2260-201ENSMUST00000184965 657 ntBASIC11.72□□□□□ -0.53
Sdc3Q64519 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.72□□□□□ -0.53
Sdc3Q64519 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.72□□□□□ -0.53
Sdc3Q64519 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sdc3Q64519 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc3Q64519 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Sdc3Q64519 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.71□□□□□ -0.53
Sdc3Q64519 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.71□□□□□ -0.53
Sdc3Q64519 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.71□□□□□ -0.53
Sdc3Q64519 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.71□□□□□ -0.53
Sdc3Q64519 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.71□□□□□ -0.53
Sdc3Q64519 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sdc3Q64519 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.71□□□□□ -0.53
Sdc3Q64519 Gm9083-201ENSMUST00000120423 819 ntBASIC11.71□□□□□ -0.53
Sdc3Q64519 Gm13665-201ENSMUST00000120830 528 ntBASIC11.71□□□□□ -0.53
Sdc3Q64519 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.71□□□□□ -0.53
Sdc3Q64519 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.71□□□□□ -0.53
Sdc3Q64519 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.71□□□□□ -0.53
Sdc3Q64519 Gm24990-201ENSMUST00000157406 323 ntBASIC11.71□□□□□ -0.53
Sdc3Q64519 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms