Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Gm11667-201ENSMUST00000119828 486 ntBASIC9.37□□□□□ -0.91
Notch3Q61982 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.37□□□□□ -0.91
Notch3Q61982 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Notch3Q61982 Gm23363-201ENSMUST00000175024 79 ntBASIC9.37□□□□□ -0.91
Notch3Q61982 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC9.37□□□□□ -0.91
Notch3Q61982 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC9.37□□□□□ -0.91
Notch3Q61982 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Gm45925-201ENSMUST00000218882 744 ntBASIC9.37□□□□□ -0.91
Notch3Q61982 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.37□□□□□ -0.91
Notch3Q61982 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Notch3Q61982 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Notch3Q61982 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.36□□□□□ -0.91
Notch3Q61982 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
Notch3Q61982 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC9.36□□□□□ -0.91
Notch3Q61982 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Notch3Q61982 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Notch3Q61982 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Gm14460-201ENSMUST00000121511 639 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm6407-201ENSMUST00000176468 549 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Gm29615-201ENSMUST00000185371 697 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm28224-201ENSMUST00000186078 697 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm29001-201ENSMUST00000186177 697 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm28292-201ENSMUST00000186593 697 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm28101-201ENSMUST00000187608 697 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm29076-201ENSMUST00000187689 697 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm28302-201ENSMUST00000187931 697 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm28646-201ENSMUST00000188220 697 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm28205-201ENSMUST00000189177 697 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm29032-201ENSMUST00000189797 697 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm28695-201ENSMUST00000190300 697 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm37448-201ENSMUST00000192795 697 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Notch3Q61982 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.36□□□□□ -0.91
Notch3Q61982 Gm39404-201ENSMUST00000216350 313 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Notch3Q61982 Ntng1-201ENSMUST00000051253 327 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Mir339-201ENSMUST00000083659 96 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Gm28323-201ENSMUST00000186817 2499 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Gm37861-201ENSMUST00000193534 2869 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.36□□□□□ -0.91
Notch3Q61982 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.36□□□□□ -0.91
Notch3Q61982 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Gm12314-201ENSMUST00000118104 538 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Gm14999-201ENSMUST00000121039 624 ntBASIC9.36□□□□□ -0.91
Notch3Q61982 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.36□□□□□ -0.91
Notch3Q61982 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.36□□□□□ -0.91
Notch3Q61982 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.36□□□□□ -0.91
Notch3Q61982 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC9.36□□□□□ -0.91
Notch3Q61982 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC9.36□□□□□ -0.91
Notch3Q61982 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.36□□□□□ -0.91
Notch3Q61982 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Notch3Q61982 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Notch3Q61982 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms