Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.32□□□□□ -0.28
Col11a1Q61245 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Col11a1Q61245 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col11a1Q61245 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col11a1Q61245 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col11a1Q61245 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col11a1Q61245 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Col11a1Q61245 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col11a1Q61245 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Col11a1Q61245 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Mir181d-201ENSMUST00000102383 72 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm11996-201ENSMUST00000117538 915 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm26047-201ENSMUST00000157308 113 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm23400-201ENSMUST00000174994 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm26463-201ENSMUST00000175065 101 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm24332-201ENSMUST00000175102 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm25959-201ENSMUST00000175112 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm22475-201ENSMUST00000175169 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm22903-201ENSMUST00000175193 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm25070-201ENSMUST00000175237 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm24159-201ENSMUST00000175264 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm25299-201ENSMUST00000175283 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm23798-201ENSMUST00000175560 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm23802-201ENSMUST00000175565 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm25708-201ENSMUST00000177687 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm24370-201ENSMUST00000178007 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm23049-201ENSMUST00000178068 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm28019-201ENSMUST00000178138 101 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm25571-201ENSMUST00000178322 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm25355-201ENSMUST00000178456 101 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm24975-201ENSMUST00000178492 101 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm23189-201ENSMUST00000178954 102 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm25100-201ENSMUST00000179750 101 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm23064-201ENSMUST00000179866 101 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm7069-201ENSMUST00000182418 1008 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm42511-201ENSMUST00000196160 234 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Gm26047-202ENSMUST00000198840 115 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.32□□□□□ -0.28
Col11a1Q61245 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.31□□□□□ -0.28
Col11a1Q61245 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.31□□□□□ -0.28
Col11a1Q61245 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Col11a1Q61245 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Col11a1Q61245 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col11a1Q61245 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
Col11a1Q61245 Gm25562-201ENSMUST00000104608 133 ntBASIC13.31□□□□□ -0.28
Col11a1Q61245 Gm13039-201ENSMUST00000118638 794 ntBASIC13.31□□□□□ -0.28
Col11a1Q61245 Gm6630-201ENSMUST00000119199 454 ntBASIC13.31□□□□□ -0.28
Col11a1Q61245 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.31□□□□□ -0.28
Col11a1Q61245 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Col11a1Q61245 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC13.31□□□□□ -0.28
Col11a1Q61245 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Col11a1Q61245 AC154759.1-201ENSMUST00000224137 1159 ntBASIC13.31□□□□□ -0.28
Col11a1Q61245 Gm5468-202ENSMUST00000227851 682 ntBASIC13.31□□□□□ -0.28
Col11a1Q61245 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.31□□□□□ -0.28
Col11a1Q61245 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col11a1Q61245 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a1Q61245 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Col11a1Q61245 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a1Q61245 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a1Q61245 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a1Q61245 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a1Q61245 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms