Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.6□□□□□ -0.55
Nr1h4Q60641 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.59□□□□□ -0.55
Nr1h4Q60641 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.59□□□□□ -0.55
Nr1h4Q60641 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.59□□□□□ -0.55
Nr1h4Q60641 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Gm13315-201ENSMUST00000120376 991 ntBASIC11.59□□□□□ -0.55
Nr1h4Q60641 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.59□□□□□ -0.55
Nr1h4Q60641 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Gm26927-201ENSMUST00000182385 965 ntBASIC11.59□□□□□ -0.55
Nr1h4Q60641 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.59□□□□□ -0.55
Nr1h4Q60641 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nr1h4Q60641 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nr1h4Q60641 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nr1h4Q60641 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nr1h4Q60641 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.58□□□□□ -0.55
Nr1h4Q60641 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Gm9083-201ENSMUST00000120423 819 ntBASIC11.58□□□□□ -0.56
Nr1h4Q60641 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.58□□□□□ -0.56
Nr1h4Q60641 Gm44958-201ENSMUST00000203734 736 ntBASIC11.58□□□□□ -0.56
Nr1h4Q60641 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.58□□□□□ -0.56
Nr1h4Q60641 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nr1h4Q60641 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms