Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Gm270-201ENSMUST00000223010 976 ntBASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm12616-201ENSMUST00000118594 382 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm14760-201ENSMUST00000121831 999 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm12624-201ENSMUST00000177615 382 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm12621-201ENSMUST00000177760 382 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm12615-201ENSMUST00000177970 382 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm12622-201ENSMUST00000177975 382 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm12627-201ENSMUST00000178412 382 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm12625-201ENSMUST00000179122 382 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm12614-201ENSMUST00000179586 382 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm12613-201ENSMUST00000180323 382 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shroom1Q5SX79 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Gm11941-201ENSMUST00000119904 610 ntBASIC12.91□□□□□ -0.34
Shroom1Q5SX79 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms