Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Gm43438-201ENSMUST00000198133 379 ntBASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Mir1938-201ENSMUST00000158746 100 ntBASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Gm17420-201ENSMUST00000164753 153 ntBASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Gm27514-201ENSMUST00000183692 110 ntBASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Gm42599-201ENSMUST00000201308 469 ntBASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Gm6007-201ENSMUST00000208170 823 ntBASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Vmn1r223Q5SSA0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Vmn1r223Q5SSA0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.65□□□□□ -0.71
Vmn1r223Q5SSA0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Vmn1r223Q5SSA0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.65□□□□□ -0.71
Vmn1r223Q5SSA0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Vmn1r223Q5SSA0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Vmn1r223Q5SSA0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Vmn1r223Q5SSA0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms