Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Gm8100-201ENSMUST00000182906 988 ntBASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Gm27530-201ENSMUST00000184096 98 ntBASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38aQ4FK66 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Gm12165-201ENSMUST00000117047 342 ntBASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Gm13045-201ENSMUST00000119019 712 ntBASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Gm23085-201ENSMUST00000157849 293 ntBASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Gm5706-201ENSMUST00000181525 993 ntBASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Gm19353-201ENSMUST00000184561 445 ntBASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Gm9797-202ENSMUST00000218003 294 ntBASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38aQ4FK66 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Gm23251-201ENSMUST00000103773 110 ntBASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Gm24891-201ENSMUST00000104391 136 ntBASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Gm8566-201ENSMUST00000120174 465 ntBASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Gm2965-201ENSMUST00000198365 343 ntBASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms